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Genome Bioinformatics

Genome Bioinformatics

This site contains the reference sequence and working draft assemblies for a large collection of genomes. It also provides a portal to the ENCODE project. You can browse genomes of a number of model organisms by chromosome--human, chimpanzee, rhesus monkey, dog, cow, mouse, rat, opossum, chicken, X tropicalis, zebrafish, tetraodon, and fugu. You can also do "in silico" PCR--In-Silico PCR searches a sequence database with a pair of PCR primers, using an indexing strategy for fast performance. The gene sorter displays a sorted table of genes that are related to one another. The relationship can be one of several types, including protein-level homology, similarity of gene expression profiles, or genomic proximity.
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More about this material

Material Type:
Reference Material
Date Added to MERLOT:
May 18, 2006
Date Modified in MERLOT:
June 12, 2018
Author:
 
Submitter:
Marty Zahn
Primary Audience:
College General Ed
Technical Format:
Website
Mobile Compatibility:
Not specified at this time
Language:
English
Cost Involved:
No
Source Code Available:
No
Creative Commons:
No

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Comments

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Harriet Mathews
Harriet Mathews (Faculty)
13 years ago

Provides pictures and genomic nformaton as well as lnks to NCBI.

Groued by Mammals, Vertebrates, Deuterosomes, Insects, Nematodes, and "Other" which has one yeast.

 

Used in course? Yes